PHATRDRAFT_34096 rna binding motif protein 15b (RRM_6)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_34096 chr_4 rna binding motif protein 15b (RRM_6) 1084570 1088366 -

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0064

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
RRM_6 RNA recognition motif (a.k.a. RRM, RBD, or RNP domain); RNA recognition motif (a.k.a. RRM, RBD, or... cl17169 56.0358 1.35E-09 648 - 710 specific 258445
RRM_SF superfamily RNA recognition motif (RRM) superfamily; RRM, also known as RBD (RNA binding domain) or RNP (... - 53.4326 1.30E-08 816 - 887 superfamily 266524
RRM_SF superfamily RNA recognition motif (RRM) superfamily; RRM, also known as RBD (RNA binding domain) or RNP (... - 53.4326 1.30E-08 816 - 887 superfamily 266524
TFIIS_I superfamily N-terminal domain (domain I) of transcription elongation factor S-II (TFIIS); similar to a domain... - 39.6831 0.00254165 139 - 194 superfamily 260216

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
9008 Not available 219055 300895 Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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