PHATRDRAFT_35185 signal recognition particle protein (PRK10867)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_35185 chr_7 signal recognition particle protein (PRK10867) 275889 283769 +

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0135

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0201
 0.30

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
SRP The signal recognition particle (SRP) mediates the transport to or across the plasma membrane in... cl17203 268.258 6.08E-88 94 - 265 specific 239389
Fer4_NifH superfamily The Fer4_NifH superfamily contains a variety of proteins which share a common ATP-binding domain.... - 268.258 6.08E-88 94 - 265 superfamily 266552
SRP_SPB superfamily Signal peptide binding domain; Signal peptide binding domain. - 102.198 1.73E-26 318 - 422 superfamily 251653
SRP_SPB superfamily Signal peptide binding domain; Signal peptide binding domain. - 102.198 1.73E-26 318 - 422 superfamily 251653
SRP54_N SRP54-type protein, helical bundle domain; This entry represents the N-terminal helical bundle... cl03758 69.1171 1.19E-14 2 - 65 specific 214941
SRP54_N superfamily SRP54-type protein, helical bundle domain; SRP54-type protein, helical bundle domain. - 69.1171 1.19E-14 2 - 65 superfamily 261873
PRK10867 signal recognition particle protein; Provisional - 575.875 0 2 - 423 multi-dom 236780

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
268271 Not available 189595 33302 Not available Cre11.g479750.t1.2 AT5G03940.1 Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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