PHATRDRAFT_35233 asp (abnormal spindle)-microcephaly associated (CH superfamily)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_35233 chr_7 asp (abnormal spindle)-microcephaly associated (CH superfamily) 393598 396427 +

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0424

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
CH superfamily Calponin homology domain; actin-binding domain which may be present as a single copy or in tandem... - 51.5475 6.69E-08 622 - 710 superfamily 260145
CH Calponin homology domain; Actin binding domains present in duplicate at the N-termini of spectrin-... cl00030 51.5475 6.69E-08 622 - 710 specific 214479
CH superfamily Calponin homology domain; actin-binding domain which may be present as a single copy or in tandem... - 51.5475 6.69E-08 622 - 710 superfamily 260145
PHA03160 superfamily hypothetical protein; Provisional - 43.538 0.000228624 206 - 264 superfamily 165431

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
2653 Not available 264002 152797 108540 Not available AT4G21820.1 511790

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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