PHATRDRAFT_36081 peptide chain release factor 1 (prfA)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_36081 chr_9 peptide chain release factor 1 (prfA) 502625 503701 +

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0060

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0138
 0.26

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
RF-1 RF-1 domain; This domain is found in peptide chain release factors such as RF-1 and RF-2, and a... cl17422 171.598 1.39E-52 207 - 320 specific 249886
RF-1 superfamily RF-1 domain; This domain is found in peptide chain release factors such as RF-1 and RF-2, and a... - 171.598 1.39E-52 207 - 320 superfamily 266672
PCRF PCRF domain; This domain is found in peptide chain release factors. cl17745 149.219 5.30E-44 67 - 178 specific 251973
PCRF superfamily PCRF domain; This domain is found in peptide chain release factors. - 149.219 5.30E-44 67 - 178 superfamily 266807
prfA peptide chain release factor 1; Validated - 543.517 0 1 - 356 multi-dom 234801

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
33161 Not available 186240 190667 66652 Cre16.g673617.t1.1 AT3G62910.1 Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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