PHATRDRAFT_36270 (CHD)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_36270 chr_10 (CHD) 22669 29064 -

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0104

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
CHD cyclase homology domain; Catalytic domains of the mononucleotidyl cyclases (MNC's), also... cl11967 182.779 9.09E-52 555 - 738 specific 143636
Nucleotidyl_cyc_III superfamily Class III nucleotidyl cyclases; Class III nucleotidyl cyclases are the largest, most diverse group... - 182.779 9.09E-52 555 - 738 superfamily 264492
SET SET domain; SET domains are protein lysine methyltransferase enzymes. SET domains appear to be... cl02566 52.5007 9.86E-08 1657 - 1789 specific 250181
SET superfamily SET domain; SET domains are protein lysine methyltransferase enzymes. SET domains appear to be... - 52.5007 9.86E-08 1657 - 1789 superfamily 261347
PDEase_I 3'5'-cyclic nucleotide phosphodiesterase; 3'5'-cyclic nucleotide... - 79.784 4.40E-16 870 - 1124 multi-dom 109297
CYCc Adenylyl- / guanylyl cyclase, catalytic domain; Present in two copies in mammalian adenylyl... - 154.723 6.80E-42 549 - 709 multi-dom 214485

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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