PHATRDRAFT_37636 zinc finger protein (CTH1)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_37636 chr_13 zinc finger protein (CTH1) 589214 591338 +

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0332

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0005
 0.48

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
zf-CCCH Zinc finger C-x8-C-x5-C-x3-H type (and similar); Zinc finger C-x8-C-x5-C-x3-H type (and similar). cl11592 35.994 0.00291132 179 - 205 specific 250023
zf-CCCH superfamily Zinc finger C-x8-C-x5-C-x3-H type (and similar); Zinc finger C-x8-C-x5-C-x3-H type (and similar). - 35.994 0.00291132 179 - 205 superfamily 264437
zf-CCCH Zinc finger C-x8-C-x5-C-x3-H type (and similar); Zinc finger C-x8-C-x5-C-x3-H type (and similar). cl11592 35.994 0.00291132 179 - 205 specific 250023
zf-CCCH superfamily Zinc finger C-x8-C-x5-C-x3-H type (and similar); Zinc finger C-x8-C-x5-C-x3-H type (and similar). - 35.994 0.00291132 179 - 205 superfamily 264437
CTH1 CCCH-type Zn-finger protein [General function prediction only] - 50.0507 9.42E-07 1 - 203 multi-dom 227395

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
24292 Not available 257942 178882 Not available Not available Not available 353449

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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