PHATRDRAFT_37734 (Nop25 superfamily)Phaeodactylum tricornutum | Diatom Portal

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_37734	chr_13	(Nop25 superfamily)	834781	835590	-

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0216

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0063	0.36	810 2000

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
Nop25 superfamily		Nucleolar protein 12 (25kDa); Members of this family of proteins are part of the yeast nuclear pore...	-	56.5447	1.98E-10	10 - 123	superfamily	255569

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
3919		Not available	272465	Not available	Not available	Not available	Not available	348415

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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