PHATRDRAFT_38559 translation-associated gtpase (PRK09601)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_38559 chr_16 translation-associated gtpase (PRK09601) 395130 396356 +

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0111

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0068
 0.33

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
YchF YchF GTPase; YchF is a member of the Obg family, which includes four other subfamilies of GTPases:... cl17170 327.109 2.72E-110 5 - 263 specific 206687
Ras_like_GTPase superfamily Rat sarcoma (Ras)-like superfamily of small guanosine triphosphatases (GTPases); Ras-like GTPase... - 327.109 2.72E-110 5 - 263 superfamily 266525
TGS superfamily The TGS domain, named after the ThrRS, GTPase, and SpoT/RelA proteins where it occurs, is... - 63.3616 9.40E-13 321 - 384 superfamily 265779
PRK09601 GTP-binding protein YchF; Reviewed - 373.246 3.98E-127 1 - 384 multi-dom 236583

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
454 Not available 184255 215043 Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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