PHATRDRAFT_39066 hydroxymethylbutenyl pyrophosphate reductase (S1_like superfamily)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_39066	chr_18	hydroxymethylbutenyl pyrophosphate reductase (S1_like superfamily)	243756	244733	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0294

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0028	0.40	0.011 0.03

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
S1_like superfamily		S1_like: Ribosomal protein S1-like RNA-binding domain. Found in a wide variety of RNA-associated...	-	69.8788	1.72E-15	8 - 76	superfamily	263921

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
25076		Not available	Not available	7651	107756	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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