PHATRDRAFT_41064 fibronectin-binding a domain protein (COG1293)Phaeodactylum tricornutum | Diatom Portal

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_41064	chr_27	fibronectin-binding a domain protein (COG1293)	266805	267815	-

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0029

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0010	0.55	28000 1600000

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
DUF814 superfamily		Domain of unknown function (DUF814); This domain occurs in proteins that have been annotated as...	-	61.842	2.41E-12	210 - 280	superfamily	253311
FerA superfamily		FerA (NUC095) domain; This is central domain A in proteins of the Ferlin family.	-	34.5828	0.00435822	110 - 153	superfamily	149301
COG1293		Predicted RNA-binding protein homologous to eukaryotic snRNP [Transcription]	-	88.9884	6.79E-20	39 - 306	multi-dom	224212

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
3202		Not available	178620	162245	460314	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

Add comment

Log in to post comments