PHATRDRAFT_41702 tryptophan synthase beta chain (Trp-synth_B)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_41702 chr_1 tryptophan synthase beta chain (Trp-synth_B) 1944523 1946669 +

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0153

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0098
 0.29

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Trp-synth_B Tryptophan synthase-beta: Trptophan synthase is a bifunctional enzyme that catalyses the last two... cl00342 651.138 0 299 - 663 specific 107207
Trp-synth-beta_II superfamily Tryptophan synthase beta superfamily (fold type II); this family of pyridoxal phosphate (PLP)-... - 651.138 0 299 - 663 superfamily 260370
Tryptophan_synthase_alpha Ttryptophan synthase (TRPS) alpha subunit (TSA). TPRS is a bifunctional tetrameric enzyme (2 alpha... cl17186 314.029 4.49E-102 23 - 264 specific 240075
TIM_phosphate_binding superfamily TIM barrel proteins share a structurally conserved phosphate binding motif and in general share an... - 314.029 4.49E-102 23 - 264 superfamily 266538

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
25605 Not available 230141 240357 427526 Cre03.g161400.t1.2 AT5G54810.1 564117

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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