PHATRDRAFT_43033 ubx2_schpo ubx domain-containing protein 2 (UAS)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_43033 chr_1 ubx2_schpo ubx domain-containing protein 2 (UAS) 1853461 1855954 -

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0334

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0026
 0.46

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
UAS UAS family; UAS is a domain of unknown function. Most members of this family are uncharacterized... cl00388 122.715 7.76E-33 181 - 299 specific 239256
Thioredoxin_like superfamily Protein Disulfide Oxidoreductases and Other Proteins with a Thioredoxin fold; The thioredoxin (TRX... - 122.715 7.76E-33 181 - 299 superfamily 260398
UBA_4 superfamily UBA-like domain; UBA-like domain. - 58.2378 9.07E-11 7 - 47 superfamily 258693
UBA_4 superfamily UBA-like domain; UBA-like domain. - 58.2378 9.07E-11 7 - 47 superfamily 258693
UBQ superfamily Ubiquitin-like proteins; Ubiquitin homologs; Includes ubiquitin and ubiquitin-like proteins.... - 57.6747 2.50E-10 395 - 458 superfamily 260222

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
25583 Not available 225735 251809 218037 Cre03.g191150.t1.2 AT1G14570.4 352438

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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