PHATRDRAFT_43162 ribosomal proteincomponent of cytosolic 80s ribosome and 60s large subunit (PTZ00160)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_43162	chr_1	ribosomal proteincomponent of cytosolic 80s ribosome and 60s large subunit (PTZ00160)	2208349	2208789	-

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0151

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0197	0.17	33 41000

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
PTZ00160		60S ribosomal protein L27a; Provisional	cl12022	231.835	1.42E-78	1 - 146	specific	185489
Ribosomal_L18e superfamily		Ribosomal protein L18e/L15; This family includes eukaryotic L18 as well as prokaryotic L15.	-	231.835	1.42E-78	1 - 146	superfamily	264513

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
39735		Not available	269144	306471	456021	Cre02.g115200.t1.2	AT1G23290.1	354074

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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