PHATRDRAFT_43299 (CFTR_protein)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_43299 chr_2 (CFTR_protein) 53945 58610 +

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0287

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
ABCC_MRP_domain2 ATP-binding cassette domain 2 of multidrug resistance-associated protein; The ABC subfamily C is... cl17201 322.906 3.01E-101 1158 - 1381 specific 213211
ABC_ATPase superfamily ATP-binding cassette transporter nucleotide-binding domain; ABC transporters are a large family of... - 271.65 4.91E-83 552 - 745 superfamily 266551
ABCC_MRP_domain1 ATP-binding cassette domain 1 of multidrug resistance-associated protein, subfamily C; This... cl17201 271.65 4.91E-83 552 - 745 specific 213217
ABC_ATPase superfamily ATP-binding cassette transporter nucleotide-binding domain; ABC transporters are a large family of... - 271.65 4.91E-83 552 - 745 superfamily 266551
ABC_membrane superfamily ABC transporter transmembrane region; This family represents a unit of six transmembrane helices.... - 61.9252 1.86E-10 210 - 439 superfamily 250039
ABC_membrane superfamily ABC transporter transmembrane region; This family represents a unit of six transmembrane helices.... - 61.9252 1.86E-10 210 - 439 superfamily 250039
CFTR_protein cystic fibrosis transmembrane conductor regulator (CFTR); The model describes the cystis fibrosis... - 376.943 2.42E-108 92 - 1371 multi-dom 233335

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available 172872 Not available Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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