PHATRDRAFT_43530 kco1 (ca2+ activated outward rectifying k+ channel 1) calcium-activated potassium channel outward rectifier potassium channel (Ion_trans_2)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_43530 chr_2 kco1 (ca2+ activated outward rectifying k+ channel 1) calcium-activated potassium channel outward... 726897 728126 -

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0437

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0031
 0.36

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Ion_trans_2 superfamily Ion channel; This family includes the two membrane helix type ion channels found in bacteria. - 52.6425 4.56E-09 215 - 261 superfamily 254488
Ion_trans_2 superfamily Ion channel; This family includes the two membrane helix type ion channels found in bacteria. - 52.6425 4.56E-09 215 - 261 superfamily 254488
Ion_trans_2 superfamily Ion channel; This family includes the two membrane helix type ion channels found in bacteria. - 52.6425 4.56E-09 215 - 261 superfamily 254488
Ion_trans_2 superfamily Ion channel; This family includes the two membrane helix type ion channels found in bacteria. - 52.6425 4.56E-09 215 - 261 superfamily 254488
EFh superfamily EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal... - 39.8385 9.67E-05 289 - 343 superfamily 238008
EF-hand_7 EF-hand domain pair; EF-hand domain pair. - 41.2153 3.23E-05 287 - 343 multi-dom 257819

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available 202600 177967 Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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