PHATRDRAFT_43537 Phaeodactylum tricornutum | Diatom Portal

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_43537	chr_2		748713	754004	-

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0030

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0249	0.32	29000 800000

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
C1		Protein kinase C conserved region 1 (C1) domains (Cysteine-rich domains); Some bind phorbol esters...	cl00040	43.9956	2.10E-05	650 - 701	specific	197519
C1 superfamily		Protein kinase C conserved region 1 (C1) . Cysteine-rich zinc binding domain. Some members of this...	-	43.9956	2.10E-05	650 - 701	superfamily	260150
C2 superfamily		C2 domain; The C2 domain was first identified in PKC. C2 domains fold into an 8-standed beta-...	-	37.6689	0.0069347	1220 - 1292	superfamily	265430

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	241951	255572	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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