PHATRDRAFT_43631 gene family 7 (TPM)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_43631 chr_2 gene family 7 (TPM) 1052476 1053982 -

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0376

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0157
 0.27

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
RING RING-finger (Really Interesting New Gene) domain, a specialized type of Zn-finger of 40 to 60... cl17238 46.67 6.19E-07 292 - 355 specific 238093
RING superfamily RING-finger (Really Interesting New Gene) domain, a specialized type of Zn-finger of 40 to 60... - 46.67 6.19E-07 292 - 355 superfamily 266579
TPM TLP18.3, Psb32 and MOLO-1 founding proteins of phosphatase; This family has a Rossmann-like fold.... cl01535 60.6699 2.27E-11 111 - 215 specific 252657
TPM superfamily TLP18.3, Psb32 and MOLO-1 founding proteins of phosphatase; This family has a Rossmann-like fold.... - 60.6699 2.27E-11 111 - 215 superfamily 260987

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
4333 Not available 238415 321528 Not available Cre10.g453350.t1.2 Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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