PHATRDRAFT_43826 receptor guanylyl cyclase gc-ii (CHD)Phaeodactylum tricornutum | Diatom Portal

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_43826	chr_3	receptor guanylyl cyclase gc-ii (CHD)	149398	152986	-

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0080

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0004	0.65	290000 320000

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
CHD		cyclase homology domain; Catalytic domains of the mononucleotidyl cyclases (MNC's), also...	cl11967	176.616	2.12E-50	431 - 611	specific	143636
Nucleotidyl_cyc_III superfamily		Class III nucleotidyl cyclases; Class III nucleotidyl cyclases are the largest, most diverse group...	-	176.616	2.12E-50	431 - 611	superfamily	264492
PDEase_I		3'5'-cyclic nucleotide phosphodiesterase; 3'5'-cyclic nucleotide...	-	57.0572	4.01E-09	750 - 958	multi-dom	109297

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	Not available	Not available	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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