PHATRDRAFT_43936 at hook motif familyexpressed (AAA)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_43936 chr_3 at hook motif familyexpressed (AAA) 472525 476260 -

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0096

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0101
 0.21

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
AAA The AAA+ (ATPases Associated with a wide variety of cellular Activities) superfamily represents an... cl18944 52.9187 4.08E-08 460 - 615 specific 99707
AAA superfamily The AAA+ (ATPases Associated with a wide variety of cellular Activities) superfamily represents an... - 52.9187 4.08E-08 460 - 615 superfamily 267297
IPT_PCSR IPT domain of Plexins and Cell Surface Receptors (PCSR) and related proteins . This subgroup... cl15674 42.0566 0.000115817 704 - 789 specific 238337
IPT superfamily Immunoglobulin-like fold, Plexins, Transcription factors (IPT). IPTs are also known as... - 42.0566 0.000115817 704 - 789 superfamily 265755

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
2132 Not available 252616 59515 Not available Not available Not available 302987

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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