PHATRDRAFT_44892 ribosomal protein l11 methyltransferase (LsmAD)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_44892 chr_5 ribosomal protein l11 methyltransferase (LsmAD) 563876 566410 +

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0239

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0169
 0.42

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
LsmAD superfamily LsmAD domain; This domain is found associated with Lsm domain. - 91.615 4.05E-22 252 - 321 superfamily 253887
LsmAD superfamily LsmAD domain; This domain is found associated with Lsm domain. - 91.615 4.05E-22 252 - 321 superfamily 253887
SM-ATX superfamily Ataxin 2 SM domain; This SM domain is found in Ataxin-2. - 70.7388 9.21E-15 78 - 161 superfamily 258591
SM-ATX superfamily Ataxin 2 SM domain; This SM domain is found in Ataxin-2. - 70.7388 9.21E-15 78 - 161 superfamily 258591
PBP1 Protein interacting with poly(A)-binding protein [RNA processing and modification] - 97.8723 2.02E-21 173 - 653 multi-dom 227507

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
23386 Not available 241763 Not available Not available Cre01.g063997.t1.1 AT3G14010.3 331076

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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