PHATRDRAFT_44908 short-chain dehydrogenase reductase nyc1 (SDR_c)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_44908 chr_5 short-chain dehydrogenase reductase nyc1 (SDR_c) 609454 612472 -

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0176

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0140
 0.20

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
SDR_c classical (c) SDRs; SDRs are a functionally diverse family of oxidoreductases that have a single... cl09931 153.594 7.91E-42 588 - 835 specific 212491
NADB_Rossmann superfamily Rossmann-fold NAD(P)(+)-binding proteins; A large family of proteins that share a Rossmann-fold NAD... - 153.594 7.91E-42 588 - 835 superfamily 263925
TMEM151 superfamily TMEM151 family; This family of proteins is found in eukaryotes. Proteins in this family are... - 42.4803 0.000399629 81 - 390 superfamily 258994
PRK06172 short chain dehydrogenase; Provisional - 100.596 1.97E-23 580 - 816 multi-dom 180440

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
8063 Not available 240413 218089 445986 Cre14.g608800.t1.2 AT5G04900.1 Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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