PHATRDRAFT_45673 bgal1_orysj beta-galactosidase 1 precursor (lactase 1) (Glyco_hydro_35 superfamily)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_45673	chr_7	bgal1_orysj beta-galactosidase 1 precursor (lactase 1) (Glyco_hydro_35 superfamily)	896095	899043	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0311

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0244	0.33	0.000093 160

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
Glyco_hydro_35 superfamily		Glycosyl hydrolases family 35; Glycosyl hydrolases family 35.	-	185.134	7.65E-52	159 - 528	superfamily	250519
BetaGal_dom4_5 superfamily		Beta-galactosidase jelly roll domain; This domain is found in beta galactosidase enzymes. It has a...	-	40.7638	0.000214476	659 - 764	superfamily	257692

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	209655	320345	471092	Not available	AT2G28470.2	553859

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

Add comment

Log in to post comments