PHATRDRAFT_46087 fibronectin type iii domain protein (Peptidases_S53_like)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_46087	chr_9	fibronectin type iii domain protein (Peptidases_S53_like)	225120	227843	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0014

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0111	0.46	1.8 200000

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
Peptidases_S53_like		Peptidase domain in the S53 family; Members of the peptidase S53 (sedolisin) family include...	cl10459	217.931	2.53E-64	188 - 621	specific	173798
Peptidases_S8_S53 superfamily		Peptidase domain in the S8 and S53 families; Members of the peptidases S8 (subtilisin and kexin)...	-	217.931	2.53E-64	188 - 621	superfamily	263972
PT superfamily		PT repeat; This short repeat is composed on the tetrapeptide XPTX. This repeat is found in a...	-	38.595	0.000755453	630 - 664	superfamily	113652
PT superfamily		PT repeat; This short repeat is composed on the tetrapeptide XPTX. This repeat is found in a...	-	38.595	0.000755453	630 - 664	superfamily	113652

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	232998	66143	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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