PHATRDRAFT_46145 loc443584 protein (RRM1_RBM34)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_46145	chr_9	loc443584 protein (RRM1_RBM34)	401468	402649	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0202

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0118	0.28	140 210

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
RRM1_RBM34		RNA recognition motif 1 in RNA-binding protein 34 (RBM34) and similar proteins; This subfamily...	cl17169	101.183	2.05E-26	92 - 199	specific	240840
RRM_SF superfamily		RNA recognition motif (RRM) superfamily; RRM, also known as RBD (RNA binding domain) or RNP (...	-	93.7649	6.99E-24	210 - 288	superfamily	266524
RRM_SF superfamily		RNA recognition motif (RRM) superfamily; RRM, also known as RBD (RNA binding domain) or RNP (...	-	93.7649	6.99E-24	210 - 288	superfamily	266524

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
261885		Not available	153012	326878	Not available	Cre16.g659150.t1.1	AT5G46840.2	479368

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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