PHATRDRAFT_46285 zinc knuckle domain protein (COG5222)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_46285 chr_9 zinc knuckle domain protein (COG5222) 816061 818338 +

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0234

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
DWNN superfamily DWNN domain; DWNN is a ubiquitin like domain found at the N terminus of the RBBP6 family of... - 80.351 2.88E-18 5 - 80 superfamily 149746
DWNN superfamily DWNN domain; DWNN is a ubiquitin like domain found at the N terminus of the RBBP6 family of... - 80.351 2.88E-18 5 - 80 superfamily 149746
U-box superfamily U-box domain; This domain is related to the Ring finger pfam00097 but lacks the zinc binding... - 40.372 0.000144575 280 - 353 superfamily 266741
COG5222 Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only] - 105.214 2.21E-24 1 - 372 multi-dom 227547

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
22487 Not available Not available Not available Not available Not available Not available 313706

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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