PHATRDRAFT_46389 aspartyl protease family protein (pepsin_retropepsin_like superfamily)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_46389	chr_10	aspartyl protease family protein (pepsin_retropepsin_like superfamily)	188514	190541	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0371

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0148	0.35	0.0047 2600

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
pepsin_retropepsin_like superfamily		Cellular and retroviral pepsin-like aspartate proteases; This family includes both cellular and...	-	132.503	3.70E-34	101 - 511	superfamily	264354
Asp		Eukaryotic aspartyl protease; Aspartyl (acid) proteases include pepsins, cathepsins, and renins....	-	74.6331	6.42E-15	105 - 509	multi-dom	249520

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
22305		Not available	209424	247979	Not available	Cre01.g026500.t1.1	Not available	553208

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

Add comment

Log in to post comments