PHATRDRAFT_46526 (Aph-1 superfamily)Phaeodactylum tricornutum | Diatom Portal

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_46526	chr_10	(Aph-1 superfamily)	602900	603871	-

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0089

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0031	0.36	0.0019 46000

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
Aph-1 superfamily		Aph-1 protein; This family consists of several eukaryotic Aph-1 proteins.Gamma-secretase catalyses...	-	56.5215	9.77E-10	4 - 95	superfamily	253566

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	140709	253701	Not available	Not available	Not available	471038

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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