PHATRDRAFT_46676 Phaeodactylum tricornutum | Diatom Portal

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_46676	chr_11		154212	158691	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0356

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0192	0.20	0.69 12

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
RNA_lig_T4_1 superfamily		RNA ligase; Members of this family include T4 phage proteins with ATP-dependent RNA ligase activity...	-	43.4252	0.000162189	252 - 447	superfamily	263866
DUF504 superfamily		Protein of unknown function (DUF504); Family of uncharacterized proteins.	-	39.1846	0.000788474	30 - 84	superfamily	260558

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
267957		Not available	233766	320998	459821	Cre07.g352800.t1.2	AT1G07910.2	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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