PHATRDRAFT_46734 53-exonuclease n- and i-domain-containing protein (WRN_exo)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_46734 chr_11 53-exonuclease n- and i-domain-containing protein (WRN_exo) 319011 322253 +

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0122

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0094
 0.29

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
WRN_exo DEDDy 3'-5' exonuclease domain of WRN and similar proteins; WRN is a unique RecQ... cl10012 128.08 1.22E-33 121 - 284 specific 176653
DnaQ_like_exo superfamily DnaQ-like (or DEDD) 3'-5' exonuclease domain superfamily; The DnaQ-like... - 128.08 1.22E-33 121 - 284 superfamily 263941
PIN_SF superfamily PIN (PilT N terminus) domain: Superfamily; PIN_SF The PIN (PilT N terminus) domain belongs to a... - 109.123 1.14E-26 388 - 665 superfamily 265458
H3TH_StructSpec-5'-nucleases superfamily H3TH domains of structure-specific 5' nucleases (or flap endonuclease-1-like) involved in... - 48.3405 4.82E-07 682 - 760 superfamily 265460

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
2999 Not available 238418 291707 Not available Not available Not available 523066

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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