PHATRDRAFT_46867 rnd family transporter: niemann-pick type c1 diseaseprotein (Patched)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_46867 chr_11 rnd family transporter: niemann-pick type c1 diseaseprotein (Patched) 660794 663713 +

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0355

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0100
 0.43

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Sterol-sensing superfamily Sterol-sensing domain of SREBP cleavage-activation; Sterol regulatory element-binding proteins (... - 143.113 4.34E-39 343 - 491 superfamily 256997
Patched Patched family; The transmembrane protein Patched is a receptor for the morphogene Sonic Hedgehog.... - 263.837 2.73E-75 229 - 889 multi-dom 251310

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available 237489 Cre12.g496350.t1.2 Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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