PHATRDRAFT_46872 cold-active alkaline serine protease (Peptidases_S8_S53 superfamily)Phaeodactylum tricornutum | Diatom Portal

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_46872	chr_11	cold-active alkaline serine protease (Peptidases_S8_S53 superfamily)	675383	677577	-

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0310

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0139	0.32	4.7 98

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
Peptidases_S8_S53 superfamily		Peptidase domain in the S8 and S53 families; Members of the peptidases S8 (subtilisin and kexin)...	-	171.175	7.91E-49	187 - 543	superfamily	263972
PA superfamily		PA: Protease-associated (PA) domain. The PA domain is an insert domain in a diverse fraction of...	-	67.6981	2.51E-13	409 - 508	superfamily	263543
Peptidase_S8		Subtilase family; Subtilases are a family of serine proteases. They appear to have independently...	-	112.08	1.79E-27	187 - 561	multi-dom	249571

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	Not available	Not available	194767	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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