PHATRDRAFT_47178 signal-transduction protein with cbs domains (CBS_pair_10)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_47178	chr_12	signal-transduction protein with cbs domains (CBS_pair_10)	721986	722718	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0150

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0225	0.20	12 6.8

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
CBS_pair_10		The CBS domain, named after human CBS, is a small domain originally identified in cystathionine...	cl15354	125.304	7.86E-37	44 - 155	specific	239995
CBS_pair superfamily		The CBS domain, named after human CBS, is a small domain originally identified in cystathionine...	-	125.304	7.86E-37	44 - 155	superfamily	265675
COG0517		FOG: CBS domain [General function prediction only]	-	67.1113	7.41E-15	44 - 154	multi-dom	223591

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
268840		Not available	170112	187088	Not available	Not available	AT5G10860.1	286413

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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