PHATRDRAFT_47404 xeroderma pigmentosum group c protein (BHD_3 superfamily)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_47404 chr_13 xeroderma pigmentosum group c protein (BHD_3 superfamily) 542539 545112 +

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0248

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
BHD_3 superfamily Rad4 beta-hairpin domain 3; This short domain is found in the Rad4 protein. This domain binds to... - 66.7954 2.41E-13 745 - 816 superfamily 199011
BHD_1 Rad4 beta-hairpin domain 1; This short domain is found in the Rad4 protein. This domain binds to... cl11062 62.244 5.67E-12 598 - 650 specific 255963
BHD_1 superfamily Rad4 beta-hairpin domain 1; This short domain is found in the Rad4 protein. This domain binds to... - 62.244 5.67E-12 598 - 650 superfamily 264205
BHD_2 superfamily Rad4 beta-hairpin domain 2; This short domain is found in the Rad4 protein. This domain binds to... - 46.9114 1.19E-06 656 - 736 superfamily 264206
Rad4 superfamily Rad4 transglutaminase-like domain; Rad4 transglutaminase-like domain. - 43.1426 4.40E-05 429 - 539 superfamily 252194

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
8733 Not available 227534 227307 Not available Cre12.g557400.t1.2 AT5G16630.2 489952

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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