PHATRDRAFT_47594 leader peptidase i (sigpep_I_bact)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_47594 chr_14 leader peptidase i (sigpep_I_bact) 218571 220370 -

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0372

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0205
 0.32

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
S26_SPase_I The S26 Type I signal peptidase (SPase; LepB; leader peptidase B; leader peptidase I; EC 3.4.21.89... cl10465 63.7587 2.01E-12 415 - 576 specific 119398
Peptidase_S24_S26 superfamily The S24, S26 LexA/signal peptidase superfamily contains LexA-related and type I signal peptidase... - 63.7587 2.01E-12 415 - 576 superfamily 263975
MATH MATH (meprin and TRAF-C homology) domain; an independent folding unit with an eight-stranded beta-... cl02446 37.3587 0.00217075 109 - 192 specific 238068
MATH superfamily MATH (meprin and TRAF-C homology) domain; an independent folding unit with an eight-stranded beta-... - 37.3587 0.00217075 109 - 192 superfamily 261289
sigpep_I_bact signal peptidase I, bacterial type; This model represents signal peptidase I from most bacteria.... - 93.8485 3.72E-22 394 - 584 multi-dom 233790

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
263724 Not available 162086 305336 97694 Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

Add comment

Log in to post comments