PHATRDRAFT_47824 af323582_1beta transducin-like protein het-e2c (WD40 superfamily)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_47824	chr_15	af323582_1beta transducin-like protein het-e2c (WD40 superfamily)	167466	168925	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0242

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0169	0.42	430 6300

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
WD40 superfamily		WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions...	-	104.339	2.54E-25	123 - 459	superfamily	238121
COG2319		FOG: WD40 repeat [General function prediction only]	-	78.9771	4.60E-16	82 - 375	multi-dom	225201

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
3563		Not available	171158	66011	Not available	Not available	AT5G51980.2	495899

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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