PHATRDRAFT_47826 npap (nuclear polypolymerase) nucleotidyltransferase (PTZ00418)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_47826 chr_15 npap (nuclear polypolymerase) nucleotidyltransferase (PTZ00418) 171807 174140 -

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0323

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0033
 0.42

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
NT_PAP_TUTase Nucleotidyltransferase (NT) domain of poly(A) polymerases and terminal uridylyl transferases; Poly(... cl11966 66.8119 3.86E-13 160 - 241 specific 143392
Rel-Spo_like superfamily RelA- and SpoT-like ppGpp Synthetases and Hydrolases, catalytic domain; The Rel-Spo superfamily... - 66.8119 3.86E-13 160 - 241 superfamily 264491
PAP_RNA-bind superfamily Poly(A) polymerase predicted RNA binding domain; Based on its similarity structurally to the RNA... - 68.4466 2.20E-13 521 - 646 superfamily 252881
PTZ00418 Poly(A) polymerase; Provisional - 277.066 1.27E-82 115 - 702 multi-dom 240410

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
29013 Not available 157568 174581 Not available Not available Not available 442904

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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