PHATRDRAFT_48381 actin cortical patch (WD40 superfamily)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_48381 chr_17 actin cortical patch (WD40 superfamily) 286144 288411 +

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0188

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0089
 0.28

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
WD40 superfamily WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions... - 117.436 4.24E-29 401 - 705 superfamily 238121
WD40 superfamily WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions... - 117.436 4.24E-29 401 - 705 superfamily 238121
COG2319 FOG: WD40 repeat [General function prediction only] - 87.8367 1.72E-18 115 - 612 multi-dom 225201

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
23728 Not available 185021 260507 432527 Not available AT3G18060.1 Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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