PHATRDRAFT_48423 delta 12 fatty acid desaturase (Delta12-FADS-like)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_48423	chr_17	delta 12 fatty acid desaturase (Delta12-FADS-like)	423702	425189	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0494

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0040	0.38

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
Delta12-FADS-like		The Delta12 Fatty Acid Desaturase (Delta12-FADS)-like CD includes the integral-membrane enzymes,...	cl00615	237.509	8.28E-75	121 - 431	specific	239584
Membrane-FADS-like superfamily		The membrane fatty acid desaturase (Membrane_FADS)-like CD includes membrane FADSs, alkane...	-	237.509	8.28E-75	121 - 431	superfamily	260534

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
3143		Not available	178606	244347	76102	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

Add comment

Log in to post comments