PHATRDRAFT_48611 (Rab3-GTPase_cat)Phaeodactylum tricornutum | Diatom Portal

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_48611	chr_18	(Rab3-GTPase_cat)	361942	365832	-

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0119

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0096	0.43	26000 230

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
Rab3-GTPase_cat superfamily		Rab3 GTPase-activating protein catalytic subunit; This family is the probable catalytic subunit of...	-	208.725	1.80E-61	906 - 1089	superfamily	258157
Rab3-GTPase_cat superfamily		Rab3 GTPase-activating protein catalytic subunit; This family is the probable catalytic subunit of...	-	208.725	1.80E-61	906 - 1089	superfamily	258157

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
23992		Not available	268064	208354	Not available	Not available	AT5G55060.2	345196

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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