PHATRDRAFT_48924 arginine-trna-protein transferase 1 homolog (ATE_C)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_48924	chr_20	arginine-trna-protein transferase 1 homolog (ATE_C)	43779	45701	-

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0043

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0244	0.33	0.000093 160

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
ATE_C superfamily		Arginine-tRNA-protein transferase, C terminus; This family represents the C terminal region of the...	-	148.765	2.64E-42	419 - 536	superfamily	252553
ATE_C superfamily		Arginine-tRNA-protein transferase, C terminus; This family represents the C terminal region of the...	-	148.765	2.64E-42	419 - 536	superfamily	252553
ATE_N superfamily		Arginine-tRNA-protein transferase, N terminus; This family represents the N terminal region of the...	-	97.2149	3.85E-24	29 - 110	superfamily	252552
ATE_N superfamily		Arginine-tRNA-protein transferase, N terminus; This family represents the N terminal region of the...	-	97.2149	3.85E-24	29 - 110	superfamily	252552

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
261041		Not available	249254	250146	Not available	Cre13.g580600.t1.2	AT3G11240.1	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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