PHATRDRAFT_49135 Phaeodactylum tricornutum | Diatom Portal

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_49135	chr_21		21263	25506	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0307

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0150	0.31	0.0000036 12000

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
DUF4414 superfamily		Domain of unknown function (DUF4414); This family is frequently found on DNA binding proteins of...	-	37.3264	0.00384374	458 - 539	superfamily	258547
crt_membr superfamily		carotene biosynthesis associated membrane protein; This model represents a family of hydrophobic...	-	39.383	0.00612591	120 - 174	superfamily	234218
UPF0564		Uncharacterized protein family UPF0564; This family of proteins has no known function. However, one...	-	47.0833	1.63E-05	1094 - 1283	multi-dom	256079

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	Not available	Not available	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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