PHATRDRAFT_49177 (NT_PAP_TUTase)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_49177 chr_21 (NT_PAP_TUTase) 134455 138806 +

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0215

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0075
 0.22

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
NT_PAP_TUTase Nucleotidyltransferase (NT) domain of poly(A) polymerases and terminal uridylyl transferases; Poly(... cl11966 85.6867 3.19E-19 934 - 1063 specific 143392
Rel-Spo_like superfamily RelA- and SpoT-like ppGpp Synthetases and Hydrolases, catalytic domain; The Rel-Spo superfamily... - 85.6867 3.19E-19 934 - 1063 superfamily 264491
PAP_assoc superfamily Cid1 family poly A polymerase; This domain is found in poly(A) polymerases and has been shown to... - 56.4257 1.34E-09 1207 - 1267 superfamily 252188
PAP_assoc superfamily Cid1 family poly A polymerase; This domain is found in poly(A) polymerases and has been shown to... - 56.4257 1.34E-09 1207 - 1267 superfamily 252188

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available 235870 236663 Not available Not available AT2G45620.1 524332

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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