PHATRDRAFT_49558 tetratricopeptide tpr_2 (HSF_DNA-bind)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_49558	chr_23	tetratricopeptide tpr_2 (HSF_DNA-bind)	35105	39056	-

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0221

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0021	0.40

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
TPR superfamily		Tetratricopeptide repeat domain; typically contains 34 amino acids [WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF...	-	55.0788	5.27E-09	751 - 864	superfamily	238112
TPR superfamily		Tetratricopeptide repeat domain; typically contains 34 amino acids [WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF...	-	55.0788	5.27E-09	751 - 864	superfamily	238112
TPR superfamily		Tetratricopeptide repeat domain; typically contains 34 amino acids [WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF...	-	55.0788	5.27E-09	751 - 864	superfamily	238112
TPR superfamily		Tetratricopeptide repeat domain; typically contains 34 amino acids [WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF...	-	55.0788	5.27E-09	751 - 864	superfamily	238112
TPR superfamily		Tetratricopeptide repeat domain; typically contains 34 amino acids [WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF...	-	55.0788	5.27E-09	751 - 864	superfamily	238112
TPR superfamily		Tetratricopeptide repeat domain; typically contains 34 amino acids [WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF...	-	55.0788	5.27E-09	751 - 864	superfamily	238112
HSF_DNA-bind		HSF-type DNA-binding; HSF-type DNA-binding.	cl12113	102.963	1.84E-25	101 - 196	specific	249865
HSF_DNA-bind superfamily		HSF-type DNA-binding; HSF-type DNA-binding.	-	102.963	1.84E-25	101 - 196	superfamily	264552
TPR_12		Tetratricopeptide repeat; Tetratricopeptide repeat.	-	53.1498	1.94E-08	748 - 822	multi-dom	257749
TPR_12		Tetratricopeptide repeat; Tetratricopeptide repeat.	-	53.1498	1.94E-08	748 - 822	multi-dom	257749

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Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	Not available	Not available	Not available	Cre16.g656200.t1.2	AT1G01320.1	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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