PHATRDRAFT_49589 (ARM)Phaeodactylum tricornutum | Diatom Portal

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_49589	chr_23	(ARM)	133558	134556	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0293

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0009	0.43	0.000000021 6000

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
ARM superfamily		Armadillo/beta-catenin-like repeats. An approximately 40 amino acid long tandemly repeated sequence...	-	47.6943	2.72E-07	200 - 320	superfamily	237987
ARM superfamily		Armadillo/beta-catenin-like repeats. An approximately 40 amino acid long tandemly repeated sequence...	-	47.6943	2.72E-07	200 - 320	superfamily	237987

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
24556		Not available	Not available	Not available	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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