PHATRDRAFT_49748 Phaeodactylum tricornutum | Diatom Portal

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_49748	chr_24		144914	153997	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0148

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0090	0.41	0.000000000055 7600

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
CLASP_N superfamily		CLASP N terminal; This region is found at the N terminal of CLIP-associated proteins (CLASPs)....	-	39.1015	0.00880118	1603 - 1722	superfamily	256996
HEAT_2		HEAT repeats; This family includes multiple HEAT repeats.	-	40.7875	0.000647685	1660 - 1756	multi-dom	257956

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
270116		Not available	276884	185424	468400	Cre01.g015600.t1.1	AT1G64790.1	485685

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

Add comment

Log in to post comments