PHATRDRAFT_49856 atp-binding-cassette protein (ABC_ATPase superfamily)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_49856 chr_25 atp-binding-cassette protein (ABC_ATPase superfamily) 100363 102983 +

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0086

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0074
 0.46

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
ABC_ATPase superfamily ATP-binding cassette transporter nucleotide-binding domain; ABC transporters are a large family of... - 166.678 8.49E-47 128 - 363 superfamily 266551
ABC2_membrane ABC-2 type transporter; ABC-2 type transporter. cl17235 95.4022 5.96E-22 474 - 687 specific 250332
ABC2_membrane superfamily ABC-2 type transporter; ABC-2 type transporter. - 95.4022 5.96E-22 474 - 687 superfamily 266576
CcmA ABC-type multidrug transport system, ATPase component [Defense mechanisms] - 147.454 2.81E-39 134 - 426 multi-dom 224054
ABC2_membrane_3 ABC-2 family transporter protein; This family is related to the ABC-2 membrane transporter family... - 50.0386 8.91E-07 529 - 682 multi-dom 257232

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
11307 Not available 189569 326112 231118 Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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