PHATRDRAFT_49903 cystathionine gamma-synthase (MetC)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_49903	chr_25	cystathionine gamma-synthase (MetC)	251099	253263	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0248

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0082	0.37	3.1 500

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
MetC		Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]	cl18945	209.366	9.40E-61	304 - 645	specific	223699
AAT_I superfamily		Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent...	-	209.366	9.40E-61	304 - 645	superfamily	267298

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	276042	314525	Not available	Not available	Not available	552553

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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