PHATRDRAFT_50384 methionine sulfoxide reductase a (PMSR superfamily)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_50384	chr_29	methionine sulfoxide reductase a (PMSR superfamily)	188220	189160	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0029

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0026	0.46	480 11000

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
PMSR superfamily		Peptide methionine sulfoxide reductase; This enzyme repairs damaged proteins. Methionine sulfoxide...	-	66.8495	4.03E-14	63 - 233	superfamily	260385
PsbQ superfamily		Oxygen evolving enhancer protein 3 (PsbQ); This family consists of the plant specific oxygen...	-	36.2709	0.00424365	8 - 60	superfamily	244069

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
23492		Not available	270824	305634	119154	Cre14.g609400.t1.1	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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