PHATRDRAFT_50428 retinal guanylate cyclase (CHD)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_50428 chr_29 retinal guanylate cyclase (CHD) 331067 333517 +

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0287

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0004
 0.65

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
CHD cyclase homology domain; Catalytic domains of the mononucleotidyl cyclases (MNC's), also... cl11967 183.935 9.59E-54 185 - 366 specific 143636
Nucleotidyl_cyc_III superfamily Class III nucleotidyl cyclases; Class III nucleotidyl cyclases are the largest, most diverse group... - 183.935 9.59E-54 185 - 366 superfamily 264492
CYCc Adenylyl- / guanylyl cyclase, catalytic domain; Present in two copies in mammalian adenylyl... - 150.871 1.75E-41 177 - 341 multi-dom 214485
PDEase_I 3'5'-cyclic nucleotide phosphodiesterase; 3'5'-cyclic nucleotide... - 71.3096 5.99E-14 523 - 736 multi-dom 109297

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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