PHATRDRAFT_51024 dna-binding horma domain-containing protein (HORMA)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_51024	chr_12	dna-binding horma domain-containing protein (HORMA)	109916	110643	-

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0096

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0101	0.21	39 470

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
HORMA superfamily		HORMA domain; The HORMA (for Hop1p, Rev7p and MAD2) domain has been suggested to recognize...	-	157.872	4.56E-48	13 - 199	superfamily	251210
HORMA superfamily		HORMA domain; The HORMA (for Hop1p, Rev7p and MAD2) domain has been suggested to recognize...	-	157.872	4.56E-48	13 - 199	superfamily	251210

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
7890		Not available	166954	253664	69270	Cre08.g380400.t1.2	AT3G25980.1	285513

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

Add comment

Log in to post comments